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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs8188193 chr5:46122530 C/G LOC647121 chr1:121260910-121313686:+ 0.38 8.14 3.49E-15 Box Plot
THCA rs8188203 chr5:49457282 T/C LOC647121 chr1:121260910-121313686:+ -0.35 -7.63 1.3E-13 Box Plot
THCA rs8188217 chr5:49478029 C/T LOC647121 chr1:121260910-121313686:+ -0.36 -7.69 8.26E-14 Box Plot
THCA rs8188231 chr5:46187026 A/G LOC647121 chr1:121260910-121313686:+ 0.37 7.89 2.01E-14 Box Plot
THCA rs8188241 chr5:46204748 A/G LOC647121 chr1:121260910-121313686:+ 0.34 6.39 3.95E-10 Box Plot
THCA rs8188245 chr5:46174864 C/T LOC647121 chr1:121260910-121313686:+ -0.34 -6.59 1.17E-10 Box Plot
THCA rs8188255 chr5:46372380 G/C LOC647121 chr1:121260910-121313686:+ -0.36 -7.79 4.29E-14 Box Plot
THCA rs8188257 chr5:49514103 T/G LOC647121 chr1:121260910-121313686:+ -0.37 -7.91 1.74E-14 Box Plot
THCA rs8188258 chr5:46187386 G/T LOC647121 chr1:121260910-121313686:+ 0.37 7.89 2.01E-14 Box Plot
THCA rs8188276 chr5:46182833 A/G LOC647121 chr1:121260910-121313686:+ 0.37 7.99 1.04E-14 Box Plot
THCA rs8188290 chr5:46047317 G/T LOC647121 chr1:121260910-121313686:+ 0.36 7.53 2.63E-13 Box Plot
THCA rs8188292 chr5:46191504 T/A LOC647121 chr1:121260910-121313686:+ 0.37 7.95 1.36E-14 Box Plot
THCA rs8188296 chr5:46222050 T/C LOC647121 chr1:121260910-121313686:+ 0.37 8.1 4.55E-15 Box Plot
THCA rs8189066 chr11:48792729 G/A FOLH1B chr11:89372395-89431886:+ 0.44 6.34 5.35E-10 Box Plot
THCA rs822340 chr9:5453260 C/T SHFM1 chr7:96125596-96339203:- -0.18 -6.42 3.34E-10 Box Plot